PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g013110.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 254aa    MW: 29341.1 Da    PI: 5.9864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g013110.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.96.9e-102168154
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54
                      s++kGV+  k +g W A+I   +      k ++lg +  +eeAa a+++a+ kl 
  Pd.00g013110.m01 21 SRFKGVSLLK-SGNWGARISYmY------KPYWLGAYQMEEEAAIAYDRAAIKLQ 68
                      789*****99.7******87733......**********************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEAEFVSESR VDMVLQRGPS SRFKGVSLLK SGNWGARISY MYKPYWLGAY QMEEEAAIAY  60
DRAAIKLQRG DTPLNFHWSK YSAEESIFQS QYSTEEILSM LKDKTYSSKL MNFLSRHSSG  120
SGTRTTTFMN EQGISYHFLF QKELTHRDVT HKCFLIPREF SFRCLPPPEG IINAGEDEAR  180
MNNLNQKDIV MFYRCEYEGE VLGREVYMID YQRSNGENYV LEHSSGSSTI ELEADCKEKE  240
TKKGFKLFGV EING
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.11e-23RAV family protein