PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g013380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 206aa    MW: 22490.3 Da    PI: 9.7803
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g013380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.71.2e-16741135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  Pd.00g013380.m01  7 CYHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGT 41
                      ****************55555***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MGKQGPCYHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDYEDH  60
RVSRVKSISI NKNKEIKLVK RKQNPDSVMV GGVAADYAHG FRKVTDEDTS NRSSSGSAVS  120
NSESCAQFGS ADASDLTGPA QSMVWDSMVP SRKRTCIGRP KPSPVEKLTK DLYTILHEQQ  180
SSYFSGKVMQ PNSQARLSTL KVAVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.35e-71GATA family protein