PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g020270.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 270aa    MW: 30726.7 Da    PI: 7.6905
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g020270.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.21.4e-28106193291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  Pd.00g020270.m01 106 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 193
                       ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MWQERRENAM LMWSSRIFME FSVDGDVSGE VVGSSAELEI SRAGDENETG GSSIEGAFQL  60
GQDDKMNQDS PGKDIIPQAV PVVSVVPADE PYVGQEFETE AAAHAFYNAY ATRVGFIIRV  120
SKLSRSRRDG SAIGRALVCN KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVSSGKWVV  180
TKFVKEHTHP LTPGKGRRDC IYDQYPNEHD KIRELSQQLA IEKKRAATYK RHLDLIFEHI  240
EEHNESLSKK IQHIVESVKE IEGKEQQQHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-100FAR1 family protein