PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g020520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 195aa    MW: 21716.5 Da    PI: 6.9364
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g020520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-191060155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + g
  Pd.00g020520.m01 10 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 60
                      59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MLKMLLVVKK KFRGVRQRHW GSWVSEIRHP LLKRRVWLGT FETAEEAARA YDEAAILMSG  60
RNAKTNFPVL TNEVSNDHNN NNSSSSSSSS ALSAILSAKL RKCCKSPSPS LTCLRLDTEN  120
SHIGVWQKGA GPRSDSNWLM MVELDQKSLQ PPQPETSTSA LDTEEMAAGQ DGGDDSMNDE  180
ERVALQMIEE LLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-58ERF family protein