PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g022540.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 371aa MW: 40906.1 Da PI: 9.2247

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g022540.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.9	3.4e-15	50	109	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g022540.m01 50 SQFRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 109 789****************655454478446***********************98 PP
2	AP2	48.9	1.6e-15	152	203	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g022540.m01 152 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 203 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MSPSLQQNGN NMGAISQLQI VESKKRPVGK SAAREPVPRK SIDTFGQRTS QFRGVTRHRW 60 TGRYEAHLWD NSCRKEGQTR KGRQVYLGGY DKEEKAARAY DLAALKYWGS TTHINFPLST 120 YEKELEEMKN MTRQEFVANL RRKSSGFSRG ASVYRGVTRH HQHGRWQARI GRVAGNKDLY 180 LGTFSTQEEA AEAYDIAAIK FRGTSAVTNF DMSRYDVKRI CSSSTLIASE LAKRSPTPAA 240 IEDFNSCGSS TSAQPLLAIA SGEPCDDMAE MVWNNNNAED HSHSHHENSN TTNSNAALGA 300 SSSRNSSSPQ SPKCSFGHTS EFGLGGGDYS HAYFSLQGAK YEDGNGGGND HSRLGNLGLV 360 PQVPMFALWN D

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MSPSLQQNGN NMGAISQLQI VESKKRPVGK SAAREPVPRK SIDTFGQRTS QFRGVTRHRW  60
TGRYEAHLWD NSCRKEGQTR KGRQVYLGGY DKEEKAARAY DLAALKYWGS TTHINFPLST  120
YEKELEEMKN MTRQEFVANL RRKSSGFSRG ASVYRGVTRH HQHGRWQARI GRVAGNKDLY  180
LGTFSTQEEA AEAYDIAAIK FRGTSAVTNF DMSRYDVKRI CSSSTLIASE LAKRSPTPAA  240
IEDFNSCGSS TSAQPLLAIA SGEPCDDMAE MVWNNNNAED HSHSHHENSN TTNSNAALGA  300
SSSRNSSSPQ SPKCSFGHTS EFGLGGGDYS HAYFSLQGAK YEDGNGGGND HSRLGNLGLV  360
PQVPMFALWN D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-131	AP2 family protein