PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g022560.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 322aa MW: 36041.5 Da PI: 8.216

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g022560.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	45.4	1.4e-14	78	104	1	27
WRC 1 daepgrCrRtDGKkWRCsrrvlegkkl 27 d+epgrCrRtDGKkWRCs+++++++k+ Pd.00g022560.m01 78 DPEPGRCRRTDGKKWRCSKEAYPDSKY 104 79***********************98 PP
2	QLQ	55.7	1.5e-19	14	47	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +FT++Q+q+L++Q+l++Ky+a++ P+P +L+ + Pd.00g022560.m01 14 PFTPNQWQELEHQALIFKYMASGIPIPTDLVYSL 47 9*****************************9766 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MLSGNPSTAR NRYPFTPNQW QELEHQALIF KYMASGIPIP TDLVYSLKRR LDNSISSRLF 60 PHPMGWGCYE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYSLSSPN NKNLSKTSSY 120 SLSPLSSSIS TETQTQHHPH QSNSPLYPFL NYPQSSSSSS RPPPGSVFSP QNNSSSATPH 180 QFLNSGSYNT QAEKDYRYLH GTKGSVDELA FFPESSANGR SILTGGSSSC QPLMSSYRGY 240 SQPQFQSLTD HHNPEVSQQS QEEEQHCFVW GTDFKSSKAI KTEKEAAETQ KSLHHFFGDW 300 QPPKSTDTWL DLSSNSGVPN DG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-48	GRF family protein