PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g027370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YB

Protein Properties

Length: 1061aa MW: 117089 Da PI: 5.3186

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g027370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.5	2.6e-55	916	1009	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 vreqdr+lPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfedy++plkvyl++yr Pd.00g027370.m01 916 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLTRYR 1006 59***************************************************************************************** PP NF-YB 92 ele 94 e + Pd.00g027370.m01 1007 EGD 1009 966 PP

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence
MEISLLLFSL LLLIASSSAQ MPAGFVSLDC GGEGVFTDEL GLEWTPDQLN YGETSFISVV 60 NDKRKQYSTL RHFPPDSRKY CYTMNVTSRT RYLLRATFLY GNFDDNNVYP KFDISLGATH 120 WSTIVISDAT TIEMRELIFL ATSPTASVCL SNATTGQPFI STLELRQFNG SVYYTDFEQQ 180 FYLSVSARIN FGADDEAPIR YPDDPFDRIW LSDSVKKANF LVDIADGTKK VSTKLPIDVN 240 RDERPPEKVM QTAVVGTNGS LTYRLNLDGF PGFGWAFTYF AEIEDLAPDE SRKFRLVLPG 300 NSEVSKAIVN IEENAQGKYR LYEPGFTNLS LPFVLSFRFG KTSDSSNGPL LNAMEINKYL 360 EKNDGSQDGA VISSFASHYS SADWALEGGD PCLPVPWSWV ECNSDPQPRV VKIKLSSKNL 420 TGDIPSDLTK LSGLVELWLD GNSLTGPIPD FTGFVDLKII HLENNQLTGG LPSSLTNLPS 480 LKELYVQNNM LSGTVPLGLL NKVVLNYTGN VNLRKGKTSG SRVNIIIGTS VGAAVLVIVT 540 IVSCVLLRKG KKKYYDQDHQ LGRPLPRQGL LSTKSDSAPT EAAHCFSYSE IEEATRNFEK 600 KIGSGGFGVV YYGRMKDERE IAVKVLTSNS YQGKREFSNE VTLLSRIHHR NLVQFLGYCQ 660 EDGRSMLVYE FMHNGTLKEH LYGPLTREQS INWIKRLEIA EDAAKVDGAS HVSSIVRGTV 720 GYLDPEYYIS QQLTDKSDVY SFGVILLELI SGQEAISNEN FGVNCRNIVQ WAKLHIESGD 780 IQGIIDPSLH GEYDIQSMWK IAEKALMCVQ AHGFMRPSIS EVLKEIQDAI SMERDAGAAR 840 DGTSDASASR NSIPSSLNLG SMDLGGTDNF LSIDESIARP TARPLNINRV SMAEAPGSPG 900 GGSHESGGDQ SPRSNVREQD RYLPIANISR IMKKALPANG KIAKDAKETV QECVSEFISF 960 ITSEASDKCQ REKRKTINGD DLLWAMATLG FEDYIDPLKV YLTRYREGDT KGSGKGGDSS 1020 SKKDAQPSSN AQISRQGSFS QGGNYSNSQS QHMMVPMQGT E

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence

MEISLLLFSL LLLIASSSAQ MPAGFVSLDC GGEGVFTDEL GLEWTPDQLN YGETSFISVV  60
NDKRKQYSTL RHFPPDSRKY CYTMNVTSRT RYLLRATFLY GNFDDNNVYP KFDISLGATH  120
WSTIVISDAT TIEMRELIFL ATSPTASVCL SNATTGQPFI STLELRQFNG SVYYTDFEQQ  180
FYLSVSARIN FGADDEAPIR YPDDPFDRIW LSDSVKKANF LVDIADGTKK VSTKLPIDVN  240
RDERPPEKVM QTAVVGTNGS LTYRLNLDGF PGFGWAFTYF AEIEDLAPDE SRKFRLVLPG  300
NSEVSKAIVN IEENAQGKYR LYEPGFTNLS LPFVLSFRFG KTSDSSNGPL LNAMEINKYL  360
EKNDGSQDGA VISSFASHYS SADWALEGGD PCLPVPWSWV ECNSDPQPRV VKIKLSSKNL  420
TGDIPSDLTK LSGLVELWLD GNSLTGPIPD FTGFVDLKII HLENNQLTGG LPSSLTNLPS  480
LKELYVQNNM LSGTVPLGLL NKVVLNYTGN VNLRKGKTSG SRVNIIIGTS VGAAVLVIVT  540
IVSCVLLRKG KKKYYDQDHQ LGRPLPRQGL LSTKSDSAPT EAAHCFSYSE IEEATRNFEK  600
KIGSGGFGVV YYGRMKDERE IAVKVLTSNS YQGKREFSNE VTLLSRIHHR NLVQFLGYCQ  660
EDGRSMLVYE FMHNGTLKEH LYGPLTREQS INWIKRLEIA EDAAKVDGAS HVSSIVRGTV  720
GYLDPEYYIS QQLTDKSDVY SFGVILLELI SGQEAISNEN FGVNCRNIVQ WAKLHIESGD  780
IQGIIDPSLH GEYDIQSMWK IAEKALMCVQ AHGFMRPSIS EVLKEIQDAI SMERDAGAAR  840
DGTSDASASR NSIPSSLNLG SMDLGGTDNF LSIDESIARP TARPLNINRV SMAEAPGSPG  900
GGSHESGGDQ SPRSNVREQD RYLPIANISR IMKKALPANG KIAKDAKETV QECVSEFISF  960
ITSEASDKCQ REKRKTINGD DLLWAMATLG FEDYIDPLKV YLTRYREGDT KGSGKGGDSS  1020
SKKDAQPSSN AQISRQGSFS QGGNYSNSQS QHMMVPMQGT E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	3e-62	NF-YB family protein