PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g028570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 226aa    MW: 25555.6 Da    PI: 5.632
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g028570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3573.6e-1825114499
                       E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++  d+++   l++pk+f++++++    s  + l+ +sg +Wev++  + ++g+++l kGW eF k   L++g ++vFk+dg+s+f   v +
  Pd.00g028570.m01  25 KMILDDTSRDTKLRIPKSFVKKYEKH--LSNPVHLKLPSGSEWEVEV--TTCDGEVWLDKGWPEFSKFYSLEQGGSLVFKYDGNSKF--QVCI 111
                       566678888899***********844..7788***************..**********************************9999..8888 PP

                       E-S CS
                B3  97 frk 99 
                       +++
  Pd.00g028570.m01 112 LDA 114
                       776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MSASLRQKID HEWPAFSATT PLFLKMILDD TSRDTKLRIP KSFVKKYEKH LSNPVHLKLP  60
SGSEWEVEVT TCDGEVWLDK GWPEFSKFYS LEQGGSLVFK YDGNSKFQVC ILDASGTEID  120
YPLALPVMEE TNEDDENKSV EILEDYDDEN DNSAEFFGDY QPCPKTRQKS GPLSCPLPRK  180
KTRLSTHSSP EISSSSSKRV VEAANKFISN HSFRVTGHIP YAGKAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-24B3 family protein