PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g029260.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 206aa MW: 21465.9 Da PI: 4.376

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g029260.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	90.4	4e-28	51	122	83	154
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ +++ ++ s++ le ++P+evss+avfrcvrvss++d+++++aYqtav+igGh+fkGiL dqG+e+ Pd.00g029260.m01 51 TNSNPASNARNGASSSGLELGNFPAEVSSPAVFRCVRVSSIEDDDDQYAYQTAVNIGGHLFKGILCDQGPET 122 4444556667888889999999************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MPGQLLGPTK CRVPHDVDNL LVIGRVVKRP EPTTFYYSDL CEMFTPLEKR TNSNPASNAR 60 NGASSSGLEL GNFPAEVSSP AVFRCVRVSS IEDDDDQYAY QTAVNIGGHL FKGILCDQGP 120 ETSNYNMNMA AAAAAAETSS GGGGVNIQPL NLIAGATTAA NTATIGGGDD EGVAGASTTV 180 IDPSSLYPAP LNTYMAGTQF FLPPRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-32	SRS family protein