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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Pd.00g029600.m01 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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| Family | bZIP | ||||||||
| Protein Properties | Length: 156aa MW: 17674.9 Da PI: 4.98 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 40.3 | 6.9e-13 | 30 | 88 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
++ +r+ +NRe+ArrsR RK++ + L+ + L++eN++ ++ ++++ +l++e+
Pd.00g029600.m01 30 RKRKRMLSNRESARRSRMRKQEHLTDLTAQIGLLKKENHQILTSMNVTNQLYMNLEAEN 88
67899************************************999999999999998887 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 156 aa Download sequence |
MGSSSGVSSG SSMLQNSGSD EDLHQVMDQR KRKRMLSNRE SARRSRMRKQ EHLTDLTAQI 60 GLLKKENHQI LTSMNVTNQL YMNLEAENSV LRAQMDELSN RLQSLNDIID CINSSKWLFE 120 AEEEDTQIIG GDGFLNPWST LCLNQPIMAS ADMFMC |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 43 | 50 | RRSRMRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75390.1 | 4e-45 | bZIP family protein | ||||




