PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g034340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 365aa MW: 42034.6 Da PI: 10.1525

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g034340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.6	2e-17	107	187	6	89
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ + +g l lp kfa++h ++k++ + ++l+ ++gr+W v+++y+ + +++GW F+++n+Lk+gD++vF l++ +e Pd.00g034340.m01 107 IQPVYIHRGYLHLPSKFARRH-LVKQRARNIILKILDGRTWLVEFKYETSI--ARFQRGWLAFARDNNLKVGDVCVFVLIDCNE 187 5566677899*********.45567789***********555554..669********************986333 PP
2	B3	50.3	4.4e-16	285	364	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p +fa+++ +k +++t+tl+ + rsW v+li k ++ l +GW+eFv +n L gD+++F+l++r++ l+v++fr Pd.00g034340.m01 285 LHVPVTFARSFVKK--RKQTVTLQV-RERSWPVNLIGHTKESGAKLCGGWREFVTENCLMKGDVCIFELIERNDIVLKVHIFR 364 789***999755..444677655.78***9877777788999******************999999**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MKFLMRYGEN LSSPVHLKLP SGAEMEIELR RSNDGLVWFD KGWPEFSKLC SLDYGENDMP 60 TKKDFGGSSS SRIFLGRMHP LTKSEKALAL QRANAFESEY PYFLVAIQPV YIHRGYLHLP 120 SKFARRHLVK QRARNIILKI LDGRTWLVEF KYETSIARFQ RGWLAFARDN NLKVGDVCVF 180 VLIDCNERLF EVFFYRTNNA EDCPLSPGHG GVAIDRVEKR RNPMIKVETD CTTNYENGKY 240 KRLKTSGQVT QRPLNSSSRS LEAANRFTPK NPSFRATLGS TPLILHVPVT FARSFVKKRK 300 QTVTLQVRER SWPVNLIGHT KESGAKLCGG WREFVTENCL MKGDVCIFEL IERNDIVLKV 360 HIFRC

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MKFLMRYGEN LSSPVHLKLP SGAEMEIELR RSNDGLVWFD KGWPEFSKLC SLDYGENDMP  60
TKKDFGGSSS SRIFLGRMHP LTKSEKALAL QRANAFESEY PYFLVAIQPV YIHRGYLHLP  120
SKFARRHLVK QRARNIILKI LDGRTWLVEF KYETSIARFQ RGWLAFARDN NLKVGDVCVF  180
VLIDCNERLF EVFFYRTNNA EDCPLSPGHG GVAIDRVEKR RNPMIKVETD CTTNYENGKY  240
KRLKTSGQVT QRPLNSSSRS LEAANRFTPK NPSFRATLGS TPLILHVPVT FARSFVKKRK  300
QTVTLQVRER SWPVNLIGHT KESGAKLCGG WREFVTENCL MKGDVCIFEL IERNDIVLKV  360
HIFRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-20	B3 family protein