PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g034960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 543aa MW: 60632.9 Da PI: 5.8316

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g034960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.8	2.1e-12	152	180	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pd.00g034960.m01 152 VGPKKILDLMNVPWLTRENVASHLQKYRL 180 57**************************8 PP
2	Response_reg	81.7	2.4e-27	19	127	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vdD+p+ +++l+++l+k y ev+++ +++al+ll+ek+ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ Pd.00g034960.m01 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQ 109 89*******************.***********999999******************6644.8**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ ++el++ Pd.00g034960.m01 110 HGACDYLLKPIRMKELRN 127 *************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK 60 DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI RDIESHESIE EVGPKKILDL MNVPWLTREN VASHLQKYRL 180 YLSRLQKDDI KSSFGGTKHS DYSSKDLQGI LSVQNSINIQ QNDVAHGSYR FSGNNLVAQN 240 ADPKSNEGDI KGIVSEPVAE PKKGTTGNIP DSQKTRSSQM DFNSSYAETK KGLVGNVPDS 300 QKIRSSQMRV NHSFASVESE VNLMAFDSTI PTTYSWNQIQ LEKEHKPLIQ LNNGFSKPPL 360 PGPQHHFQAD QLQSIPSISS RPSIPGGDVT GSSKSKPSYS EYTNHHGSRV SPTRSPTVSA 420 TDSFPGQTKS CVVDHQVSET ISTSTSNIKN QGINLSTDLE SAQRNLILGS TSPFASLDDE 480 FQICWYQGDC YGMNLELQNV EFSEYTDPTH VTEVPAHLYD ALRFEYPCDP SEYSVLDQGL 540 FIA

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MDSSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK  60
DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIESHESIE EVGPKKILDL MNVPWLTREN VASHLQKYRL  180
YLSRLQKDDI KSSFGGTKHS DYSSKDLQGI LSVQNSINIQ QNDVAHGSYR FSGNNLVAQN  240
ADPKSNEGDI KGIVSEPVAE PKKGTTGNIP DSQKTRSSQM DFNSSYAETK KGLVGNVPDS  300
QKIRSSQMRV NHSFASVESE VNLMAFDSTI PTTYSWNQIQ LEKEHKPLIQ LNNGFSKPPL  360
PGPQHHFQAD QLQSIPSISS RPSIPGGDVT GSSKSKPSYS EYTNHHGSRV SPTRSPTVSA  420
TDSFPGQTKS CVVDHQVSET ISTSTSNIKN QGINLSTDLE SAQRNLILGS TSPFASLDDE  480
FQICWYQGDC YGMNLELQNV EFSEYTDPTH VTEVPAHLYD ALRFEYPCDP SEYSVLDQGL  540
FIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	4e-81	ARR-B family protein