PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g036890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 213aa    MW: 23053.6 Da    PI: 7.0443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g036890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.7e-19105154355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrdp +ng  +r +lg++ tae+Aa a+++a+ k++g
  Pd.00g036890.m01 105 YRGVRQRP-WGKYAAEIRDPAKNG--ARMWLGTYETAEDAALAYDRAAFKIRG 154
                       9*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MLGDESDFAL LETIHQHLLD DNYFHGTLMA SLSPNIPPAV EDLGKLSIVV PGESSESSSW  60
SPPNQNGVAE PAPAAWADTT EVKDNLQPKL AARETHAPPR GRQNYRGVRQ RPWGKYAAEI  120
RDPAKNGARM WLGTYETAED AALAYDRAAF KIRGSKALLN FPHLIGSADD ACDRGRVTST  180
RRYRECCDSL ASSSDGGSPK RRRSSGVGSV GSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-30ERF family protein