PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g038550.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 165aa    MW: 17966.8 Da    PI: 8.6639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g038550.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.14.9e-06119145430
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                       +h+ +Er RR++i  ++  L++++P +
  Pd.00g038550.m01 119 SHSLAERARREKISVKMKLLQSIVPGC 145
                       8************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MELKRTMVHA PTDAASGLEV LVDEVVALLE VVDALNAIKP AELLSNDLGL LDVDPLLSHH  60
VLPHLQHRHQ EEGECKGKKQ RKQNGSEAKK QSKVSAASAE GVQRYGVRVK ARRGEATDSH  120
SLAERARREK ISVKMKLLQS IVPGCDQGLL VMGLCSSAFC FVKAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.15e-18bHLH family protein