PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g038600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 192aa    MW: 21310.1 Da    PI: 8.2117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g038600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-0953100455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    ++ + Ka +L + ++Y++ Lq
  Pd.00g038600.m01  53 SHSLAERARREQISVRMKLLQSLVPGC----DQINGKAHVLDEIIKYVQLLQ 100
                       8*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVSEEEGERK GKKQRKQNRS EAKKQSKVAA ASAEGVQRDG VRVKARRGEA TDSHSLAERA  60
RREQISVRMK LLQSLVPGCD QINGKAHVLD EIIKYVQLLQ NQVECLAAKL AFVDAMLYDD  120
CELNPSTNPC ASDQSLLAPS SSGIWRTLHR RVLWLPYYSE DQKASLIPQA QDGGSFEDIG  180
KQPAGLDHSC TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.23e-32bHLH family protein