PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g048070.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 168aa    MW: 19759.7 Da    PI: 10.3076
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g048070.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-15115161147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       r +WT+ E++l++++ +q+G+g+W++I+r    +Rt+ q+ s+ qky
  Pd.00g048070.m01 115 RTPWTKHEHKLFLKGLEQYGKGDWRSISRFCVVTRTPTQVASHAQKY 161
                       789**************************9999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
METLCFSKGP LCYPSRFSNN LSRLPQPEKP NDDQWTFDEN KRFENALTEL NLDAPYLFQK  60
LRTRVPGKTV AQIKKHFEAL FEDILMIESG HIAVPEYNKI STESKVTTKP FRRRRTPWTK  120
HEHKLFLKGL EQYGKGDWRS ISRFCVVTRT PTQVASHAQK YFLRVNKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-39MYB family protein