PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g048450.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 245aa MW: 27552.6 Da PI: 4.8035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g048450.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.2e-18	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W++ ++ g+ R++k+c++rw +yl Pd.00g048450.m01 5 KGPWTPEEDQILVSFIQKYGHGNWRALPKQAGLLRCGKSCRLRWINYL 52 79****************************99**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	58	103	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++l Pd.00g048450.m01 58 RGNFTREEEEAIIKLHDMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 103 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MGLKKGPWTP EEDQILVSFI QKYGHGNWRA LPKQAGLLRC GKSCRLRWIN YLRPDIKRGN 60 FTREEEEAII KLHDMLGNRW SAIAARLPGR TDNEIKNVWH THLKKRLKDQ TSTSSPASSA 120 SNVTSQSAEP ENMNSPQPSS SSSDVSSVTE VSAALTHDNH QDMITIKGEN MELSETFPEI 180 DDSFWSEALS ADNSSIPLEF PEATNDQYSG ELGFTFCPNM DDGMVFWYDL FIRAGHGDTP 240 ELPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-74	MYB family protein