PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g049800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 610aa MW: 71065.9 Da PI: 7.4354

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g049800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.8	3.8e-18	22	74	2	50
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....k 50 pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLp+ + Pd.00g049800.m01 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPNihrgsN 74 59*************************.89************95233320 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK 60 HDPWDLPNIH RGSNTKNINS TDPQQEAEIW TLCRIFKRNV SYKKYRADWR GLSGAKRHPM 120 DTVSSKKCTS DQDDLDQSNN YISFGASDNI ICYEEKKPVV NHTNMNNFNG NNQQLHAVGQ 180 LSSNMPATYP YMETFSNFSY QDLENELLNE NWDELRSAAI HLAFDPTHGV DQTVNVDVKR 240 KKKERDGRRR SRGSGAPMLK HYWVAFFVVV SWVVNFRVLD ASAGDADPLY RACVKQCGET 300 GCVAQRCFPQ CNFSSDGVSV DGPWYMQEPL YMQWKQWDCQ SDCRYYCMLD RENEREATGH 360 DPVKYHGKWP FKRVYGIQEP ASVAFSVLNL AMHFHGWISF FILLYYKLPL RRDKKTYYYF 420 ASLWHIYALL SFNSWFWSAV FHSRDVDLTE KLDYSSAVAI LGYSLILSIL RSFDVKDDAV 480 RVMVAAPLLA FVTTHILYLN FYKLDYGWNM QVCVVMAVVQ LLLWAIWAGV TRHPSRWKLW 540 LVVVAGGLAM LLEIYDFPPY QGFVDAHAAW HATTIPLTYV WWSFIRDDAE FLTLNQMKRL 600 KTSNLAKKAK

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK  60
HDPWDLPNIH RGSNTKNINS TDPQQEAEIW TLCRIFKRNV SYKKYRADWR GLSGAKRHPM  120
DTVSSKKCTS DQDDLDQSNN YISFGASDNI ICYEEKKPVV NHTNMNNFNG NNQQLHAVGQ  180
LSSNMPATYP YMETFSNFSY QDLENELLNE NWDELRSAAI HLAFDPTHGV DQTVNVDVKR  240
KKKERDGRRR SRGSGAPMLK HYWVAFFVVV SWVVNFRVLD ASAGDADPLY RACVKQCGET  300
GCVAQRCFPQ CNFSSDGVSV DGPWYMQEPL YMQWKQWDCQ SDCRYYCMLD RENEREATGH  360
DPVKYHGKWP FKRVYGIQEP ASVAFSVLNL AMHFHGWISF FILLYYKLPL RRDKKTYYYF  420
ASLWHIYALL SFNSWFWSAV FHSRDVDLTE KLDYSSAVAI LGYSLILSIL RSFDVKDDAV  480
RVMVAAPLLA FVTTHILYLN FYKLDYGWNM QVCVVMAVVQ LLLWAIWAGV TRHPSRWKLW  540
LVVVAGGLAM LLEIYDFPPY QGFVDAHAAW HATTIPLTYV WWSFIRDDAE FLTLNQMKRL  600
KTSNLAKKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	3e-21	NAC family protein