PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g053180.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NZZ/SPL

Protein Properties

Length: 448aa MW: 48688 Da PI: 8.0036

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g053180.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	22.6	1.8e-07	28	80	50	102
NOZZLE 50 ktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrl 102 + + kqkk rg+gva+le+ ++e+++kk ++a + t s +++ ++t Pd.00g053180.m01 28 SSKKTKQKKVPQRGLGVAQLEKIRLEDQQKKAAAAVILSTPSSLSSPTKSTSS 80 45567899999************************999999999998887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA 60 AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR 120 PPLIPTQNID VIRKPISTVP LGNNNNNNGG HGFEIQGHGS NNVPNLWNPC DFNLDQKESS 180 NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPSMVNV SSSATSSSSV 240 LNFQIEPPSN QSYYSNYTPM WPDEEKMVGM KRPYPFSLDN PPGPSINFKF PTFVAPMRAD 300 EASSCGNRCT YNLEPSGNPI FREAPSCSTS ISESNSRNSI KENGSVNGDF LTLAPPTTSS 360 RTCPSPKLNL PSTYLAFHNR EVPEFESFSY QGNAEDTNFQ PGPSGSHPQQ AFYSFFPPAK 420 AQIGRGATTI NNNCNGELGE SVDLNLKL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA  60
AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR  120
PPLIPTQNID VIRKPISTVP LGNNNNNNGG HGFEIQGHGS NNVPNLWNPC DFNLDQKESS  180
NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPSMVNV SSSATSSSSV  240
LNFQIEPPSN QSYYSNYTPM WPDEEKMVGM KRPYPFSLDN PPGPSINFKF PTFVAPMRAD  300
EASSCGNRCT YNLEPSGNPI FREAPSCSTS ISESNSRNSI KENGSVNGDF LTLAPPTTSS  360
RTCPSPKLNL PSTYLAFHNR EVPEFESFSY QGNAEDTNFQ PGPSGSHPQQ AFYSFFPPAK  420
AQIGRGATTI NNNCNGELGE SVDLNLKL