PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g053890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 159aa    MW: 18181.3 Da    PI: 9.3776
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g053890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.91.1e-4162138177
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                       +Cq+e+C ad+ eak+y+rrhkvCe+hskapvv+vsgl+qrfCqqCsrfhel+efDe+krsCrrrLa+hnerrrk++
  Pd.00g053890.m01  62 CCQAERCGADFVEAKRYYRRHKVCEFHSKAPVVMVSGLRQRFCQQCSRFHELTEFDEAKRSCRRRLAGHNERRRKSS 138
                       6**************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEAKSFEGRQ SWKEKANKDV VDEVEDDSEE EVAGMLRFEE NEKQKKAGRR GSGGGGGVSP  60
PCCQAERCGA DFVEAKRYYR RHKVCEFHSK APVVMVSGLR QRFCQQCSRF HELTEFDEAK  120
RSCRRRLAGH NERRRKSSGE PYGEGSSRRG VASKQFQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15270.18e-46SBP family protein