PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g053970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 607aa    MW: 69697.2 Da    PI: 9.9818
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g053970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.62.7e-19641451199
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + s+rl++p kf+e+++g+  + ++  l+ +s + W+vkl  + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f  +vk++++
  Pd.00g053970.m01  64 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 145
                       4.467********999888..4568***************..********************************998999..9999987 PP
2B338.91.5e-122413121589
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       r+++p++ a + g+  +    ++l+d++grsW v+l+   +++r  ++ GW e  kan++  gD+++F+l++++ 
  Pd.00g053970.m01 241 RVTIPNELAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLHMAIGWTECRKANQISPGDSIIFELVKQEA 312
                       789******999988544..7***************5.44555677899********************997543 PP
3B350.53.9e-16328415197
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkvl     + ++ l+lp  f+e+ +g++  + +  l+ ++g+ W+v+l  + + +++++ +GW++Fv+++ L+ g f+vF +dg+s+f   
  Pd.00g053970.m01 328 FFKVL--LGDFYQH-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFVRDHCLEIGNFLVFDFDGDSKF--D 411
                       66666..6666666.9**********8873.44.89**************..**********************************9999..6 PP

                       EEEE CS
                B3  94 vkvf 97 
                       v+++
  Pd.00g053970.m01 412 VTIY 415
                       6655 PP
4B351.12.4e-165085851696
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++pk+ a + g++  ++kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s   + +++
  Pd.00g053970.m01 508 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 585
                       68******999999..6779***************985555156*************************876433..35555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MAEARKQVKV RTAKQDQSLK YLNLWQQKSE NKTWLVLLTK IQMARPRKRS PKKPSFFKIL  60
IGDFSQRLRI PPKFIENFNG QSLRKCALRG PSRQWWDVKL EERENSLFFR DGWQGFVKDH  120
VLEVGDLLVF SYNGKSKFKV KIYDRSACEK NVEVAERRSG SPVPLVNKGN QAQVKDEMVE  180
LDTEDCENKT IDSDRRSCKD PISEKRPVSF CVQETSTGSI LFKSENPCFL VCSRKQHLLY  240
RVTIPNELAV AEGLRRRDAV MLQDPTGRSW LVELRVESRN RLHMAIGWTE CRKANQISPG  300
DSIIFELVKQ EARMARKLSK PSLKKQSFFK VLLGDFYQHL RLPPVFIEKL DGQSLPKCAL  360
RGPNGKLWTV ELEERENGFF FHDGWQGFVR DHCLEIGNFL VFDFDGDSKF DVTIYEPTGC  420
EKDVEAAKRR NGNPVSSVKD EIVDIETENY NKESKSKTIN AERTSRKYVM SGKRPANDCV  480
EETSTGSILF KSENSCFIKI LTKTLYPVTI PKELAIAEGL VRKKTVKLQD PAGRSWIVKL  540
RVHRSPYQRF DMTKGWAKCC RANQISQGDT IVFEFVKPSV MQIHIYRGGR VGGSECSVVL  600
VNPGLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-26B3 family protein