PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g057420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 499aa    MW: 55723.9 Da    PI: 4.6318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g057420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.69.6e-27161802128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee.................................vikevdiykvePwdLpk....kvkaeeke 57 
                        p frFhP++ee+v + Lk+kveg++ ++                                    i+e+d+yk+eP+dL +        + + 
  Pd.00g057420.m01  16 LPKFRFHPSEEEMV-NLLKNKVEGQDSQTMPdeivdkpwdlpdnesiqlfcrflkrmmqgkasqSIPEIDVYKYEPSDLAElmfpDSPYQPRA 107
                       5779**********.99********95553356788999999999*****************977**************8444553333778* PP

               NAM  58 wyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       w+ Fs+ + kya++ r nrat +g+Wk tgk ++v+s+   ++++  k+tL+f++gr +k+++t Wv +ey l
  Pd.00g057420.m01 108 WFSFSRPEYKYANSPRCNRATGKGFWKITGKPRQVKSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYYL 180
                       *************************************866566677889**********************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MSRSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQD SQTMPDEIVD KPWDLPDNES  60
IQLFCRFLKR MMQGKASQSI PEIDVYKYEP SDLAELMFPD SPYQPRAWFS FSRPEYKYAN  120
SPRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL  180
TPTDPGSNPN RLSGFVLCRM KNKSTDNESD NKKQQDVSIC VESADPGIAG CMASNSELDQ  240
AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQELC AKGGECLDSP  300
SPPERPHQHQ LPQLGNVPVT GDYIGSNSNN QAAAIHHMIP QPEDFLAYKE LEHVLGTCNP  360
DAGEPGGCVS SNMLQKQWQL CAQLGEELDS PIPPPGPPEL GNAPYVYTDE CSSWPSPIGD  420
NDSSLPNKNS IPTNYDSKPV SNTASNFENQ TRISEVYSQA EENLESFFRQ FELEGDFLHA  480
NNYIGCNESQ SATLFPQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.27e-28NAC family protein