PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g058940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 142aa    MW: 15910.2 Da    PI: 4.7251
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g058940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.16.3e-1327115196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+ vlt+ +   + +lv+p kf ++      +s   t+ + +g+ We+ +   ++s++  l  +Wk F+ +n+Lk+gD +vFk  + s+++lv
  Pd.00g058940.m01  27 FDVVLTKTNIECLYQLVVPGKFSATLP---SCS-IPTVLTFRGKNWEMVY--HGSSSHKRLD-NWKAFAIDNNLKVGDACVFKQLECSSTRLV 112
                       566777777778889999999987663...344.4577889*********..8888877787.********************4433777777 PP

                       EEE CS
                B3  94 vkv 96 
                       ++v
  Pd.00g058940.m01 113 FRV 115
                       776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGDLLTSNPV IELEGDEFWP LSGKPFFDVV LTKTNIECLY QLVVPGKFSA TLPSCSIPTV  60
LTFRGKNWEM VYHGSSSHKR LDNWKAFAID NNLKVGDACV FKQLECSSTR LVFRVQNLRG  120
DIPSEFLDKL DGDNVDAPIV LE