PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g060340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 259aa    MW: 28792.3 Da    PI: 4.7689
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g060340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP26.69.9e-0994128138
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 
                       r ++sL+llt+kf++l++++e+gi++ln++a++L   +
  Pd.00g060340.m01  94 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 128
                       6789*****************************9...3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MLGLGGQEDM ESWITKLKRK SDAADYEAES SDRTAAPGYT EAVTSPLQTH VSSKVGKANK  60
TSRLTKCSRS GPQTPASNVG SPSGPNLTPA GPCRFDSSLG LLTKKFINLI KHAEDGILDL  120
NNAADTLEVT TFLSVVMFEK QDGVVLMATT GNLKQIDEAL QRPGRMDRDE DNKEKEAARF  180
AQLWNKIISS FREEDLISDS EEELKGSNGL DEDLRLWASY RGQTLTRTVR GMMYYRKALE  240
LQAFLDMAQD DDLLLFRWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.37e-29E2F/DP family protein