PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g060830.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 180aa MW: 20193.3 Da PI: 3.7727

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g060830.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	36.6	1.3e-11	3	60	44	101
DUF260 44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 ++l+ lp +er a ++++eA+ar+ dP+yGa++ il+lq+q+ + +a+l++++e+l Pd.00g060830.m01 3 SILSMLPMSERAVASWTMTFEAHARVVDPIYGATSYILDLQEQVLNIQAQLDEAHEQL 60 67889999*********************************************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MSSILSMLPM SERAVASWTM TFEAHARVVD PIYGATSYIL DLQEQVLNIQ AQLDEAHEQL 60 ACAIAPVVDP NQDLENSIEQ SEVANPTEQA AVAKPTEFES LPQFSFTHTN NVYNENMNLN 120 YHVSGSYKNS VNIPTKNVAD GWVNNEGTSS MSFFDMEWSF EDVDELLVDP WFSTYISNIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	7e-15	LBD family protein