PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g061920.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 256aa    MW: 28883.4 Da    PI: 10.0227
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g061920.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-2067116356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pd.00g061920.m01  67 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYMLRGE 116
                       8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MIEWLKLNQN LASHSSKGFN DYSLSTTKTQ PMKRTGRSSR LQQQINQHHK QPHNNLSSAS  60
SSPGKLFRGV RQRHWGKWVA EIRLPRNRTR VWLGTFDTAE EAAIAYDTAA YMLRGEHAHL  120
NFPDLKHQLK ANALKGNTAA LLEAKLQAIS SSQAHQKAIM ESKSSQLASP NKHSADDHDD  180
HKYSNLMINS NFSQTPTRKE WQYGLESKVG SDHQVVIESK KSQQELVSAD VDAVQLSRMP  240
SLDMDMIWDA LLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-57ERF family protein