PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g063490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 693aa MW: 77902.6 Da PI: 5.7029

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g063490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.7	2.5e-19	569	655	2	84
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++ +W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ Pd.00g063490.m01 569 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSHVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIYS 655 79***********************999999****7777*****777777777777.****************993 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS 60 STPAPVKSAD DQAVDAHALS STASMEISQP SDLGREGGAM DCMGAMETFG YMDLFESNEF 120 FDPSSIFQTD SLLMEQFQQD DDHQHLLAPH QLQDPNEATA IIPQQQQEQE VAVRDEENNK 180 KDDQKENKEP DDMAMVFLEW LRSNRETVSA EDLRSVKIKK STIECAARRL GGGKEAMKQL 240 LKLVLEWVQT NHLQKRRSNS LTTKDADIVA QQQQYQDPFQ NPNPNTSPRV LESNPSCSFT 300 QTPWMAPPPH SAYDHAGGIL VPTQPPPPPP AAYPSMMGYI APDQYVNGPG PYQPSPEYHH 360 MIDSGQPTWP SSPFGMGTAH YGSFPDNNIH LAPPPQHHPQ AFVGYGSQYQ PYQYFPLNGE 420 HQMMRLGSSA TKEARKKRMA RQRRLVSHHR HGHQQQQHLN VQMPDHLLHQ QHTRLVGNAA 480 DLNCANSVPL QANPGNWFYW PTATAAPSPS PAMMPSITQE AAPPPPVQQM DRPASTQAQN 540 YNQGRSAAQE RQERRQGWKS EKNLKFLLQK VLKQSDVGSL GRIVLPKKEA ETHLPELEAR 600 DGISIPMEDI GTSHVWNMRY RYWPNNKSRM YLLENTGDFV RANGLQEGDF IVIYSDVKYD 660 TRSEGTASRA KIRGQQKAGK VSKEPACKHS SWH

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MEELEDQEDN LGVDPSEMWL DDNDQETALL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS  60
STPAPVKSAD DQAVDAHALS STASMEISQP SDLGREGGAM DCMGAMETFG YMDLFESNEF  120
FDPSSIFQTD SLLMEQFQQD DDHQHLLAPH QLQDPNEATA IIPQQQQEQE VAVRDEENNK  180
KDDQKENKEP DDMAMVFLEW LRSNRETVSA EDLRSVKIKK STIECAARRL GGGKEAMKQL  240
LKLVLEWVQT NHLQKRRSNS LTTKDADIVA QQQQYQDPFQ NPNPNTSPRV LESNPSCSFT  300
QTPWMAPPPH SAYDHAGGIL VPTQPPPPPP AAYPSMMGYI APDQYVNGPG PYQPSPEYHH  360
MIDSGQPTWP SSPFGMGTAH YGSFPDNNIH LAPPPQHHPQ AFVGYGSQYQ PYQYFPLNGE  420
HQMMRLGSSA TKEARKKRMA RQRRLVSHHR HGHQQQQHLN VQMPDHLLHQ QHTRLVGNAA  480
DLNCANSVPL QANPGNWFYW PTATAAPSPS PAMMPSITQE AAPPPPVQQM DRPASTQAQN  540
YNQGRSAAQE RQERRQGWKS EKNLKFLLQK VLKQSDVGSL GRIVLPKKEA ETHLPELEAR  600
DGISIPMEDI GTSHVWNMRY RYWPNNKSRM YLLENTGDFV RANGLQEGDF IVIYSDVKYD  660
TRSEGTASRA KIRGQQKAGK VSKEPACKHS SWH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-119	B3 family protein