PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g065850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 390aa MW: 42532.3 Da PI: 5.6734

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g065850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.2	5.6e-16	204	259	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L e ++L k+l ++++++ Pd.00g065850.m01 204 DVKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSTLLKRLTDVNQKYDN 259 68*******************************************99999998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MHSVFSVDDV SDTAWALSSP AMNRSASEWA FEQFLDEFST PAATPRRSVA VADQLTASSV 60 ASCSVASQSS TSKREDGDEE VNSDQYREFL KNQLDLACAA VALSRASSLK PVDLDNMAAE 120 TQSQLSKPSQ LAHSQSLDKD AGHGFPVQQN EADTGPVGIP ASPAVQKITG LQSKQTTSGS 180 SKEDSDDDDL EGDIEINENM DPSDVKRARR MLSNRESARR SRRRKQAQMS ELETQVGQLR 240 VEHSTLLKRL TDVNQKYDNS AVDNRILRAD IETLRAKVKM AEDSVKRVTG INPLLLAMSN 300 LPSVSIPSVN PMDGSTNAAV PMQPNSNQLF HPVVPNLATS TLPHQRLDTG FPQDPPIPLV 360 RNPQRVGPRE PLPGWDPHLS HAVPKNKKQS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MHSVFSVDDV SDTAWALSSP AMNRSASEWA FEQFLDEFST PAATPRRSVA VADQLTASSV  60
ASCSVASQSS TSKREDGDEE VNSDQYREFL KNQLDLACAA VALSRASSLK PVDLDNMAAE  120
TQSQLSKPSQ LAHSQSLDKD AGHGFPVQQN EADTGPVGIP ASPAVQKITG LQSKQTTSGS  180
SKEDSDDDDL EGDIEINENM DPSDVKRARR MLSNRESARR SRRRKQAQMS ELETQVGQLR  240
VEHSTLLKRL TDVNQKYDNS AVDNRILRAD IETLRAKVKM AEDSVKRVTG INPLLLAMSN  300
LPSVSIPSVN PMDGSTNAAV PMQPNSNQLF HPVVPNLATS TLPHQRLDTG FPQDPPIPLV  360
RNPQRVGPRE PLPGWDPHLS HAVPKNKKQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	226	RRSRRRKQ
2	221	226	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02640.1	8e-54	bZIP family protein