PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g068080.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 474aa MW: 51842.6 Da PI: 8.7905

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g068080.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	22.1	4.2e-07	405	473	6	68
NAM 6 rFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkky 68 +F+P+d+el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k ++y Pd.00g068080.m01 405 HFDPSDDELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKIINAY 473 6*******.999999876664555444456777766677******.556677899*9977766 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MESAEFVVGG CRSVCDHNRL HFEPMTRLAS STWWLCCRTA APNPLRNSCK VCNLTKIPFE 60 RLLPFGTFSF LRTQPFNPCE SSQDLGPKTT STPAPLSSPS APRFMTNLPK ISQHIRRYPS 120 WPCRIGERRS HPNFLKTPKD PSSPKAKPSS GNHIEESQHG MSFASFSGNN STGSCLNFST 180 MAQNPAIFQS LPDMAQQGYK VGLAPQAVQQ KNHQISERKT GGGSNNADDG LKAASGKSSS 240 SIGQRQTLVF DNSARTLNFM SSPVTRSWPP RSIALTTTAT NAPVDTTCYC CQVPKELRLL 300 RLERGGRLSD CLGNLRMLRK LSLQSNSFDG TVPSSLSQCT LLFSGKLPAE IGNLSNLQIF 360 NIASNHLSGE ISGELPPRLK YLNLSSNSFS GEIPKSIVNL TGLQHFDPSD DELLEHLAAK 420 CGVGNSKPHM FIDEFIPTLD GDNGIYYDHP ANLPGSKNDG SSFHFFHKII NAYA

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MESAEFVVGG CRSVCDHNRL HFEPMTRLAS STWWLCCRTA APNPLRNSCK VCNLTKIPFE  60
RLLPFGTFSF LRTQPFNPCE SSQDLGPKTT STPAPLSSPS APRFMTNLPK ISQHIRRYPS  120
WPCRIGERRS HPNFLKTPKD PSSPKAKPSS GNHIEESQHG MSFASFSGNN STGSCLNFST  180
MAQNPAIFQS LPDMAQQGYK VGLAPQAVQQ KNHQISERKT GGGSNNADDG LKAASGKSSS  240
SIGQRQTLVF DNSARTLNFM SSPVTRSWPP RSIALTTTAT NAPVDTTCYC CQVPKELRLL  300
RLERGGRLSD CLGNLRMLRK LSLQSNSFDG TVPSSLSQCT LLFSGKLPAE IGNLSNLQIF  360
NIASNHLSGE ISGELPPRLK YLNLSSNSFS GEIPKSIVNL TGLQHFDPSD DELLEHLAAK  420
CGVGNSKPHM FIDEFIPTLD GDNGIYYDHP ANLPGSKNDG SSFHFFHKII NAYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-20	NAC family protein