PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g078780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 945aa MW: 107591 Da PI: 9.0618

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g078780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67	4.7e-21	84	174	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YA +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++ r++r+etr +C+a++ vk ++ + vtk+++eH+H la Pd.00g078780.m01 84 RFYCNYALAIGFSIRRSRLRRS-KGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFVKEHSHGLA 174 5******************9.8889***********9988846677889*************999************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG 60 LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE 120 GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSLAFE 180 QHWQQMIDTY DLKGDWIEMM YRKRKRWAEA YCLGHFFGGN TTTQRVEGMH KNLKDGIGRG 240 MRLVECIPRI ERSLLRLRNE NVKDDFDSNN SQPVLRTHLR SVEEHAASIF THDIYKLIRN 300 EINKEAKLIL VQPVRNNEDP RVYTFSKFGR PDEKWTVVYY KKEQHLQCSC KLFESSGIPC 360 CHMFGVMKCD HMEQILPTLI MKRWTKDARR GSEFLVKLDD VPNETIQMAR FGSLSADFNK 420 LCFYGSQTEV AYKRLKAEFG RLNTLVETWK EQHEQTSLNL GCHNNIVRDP IVAKTKGKQT 480 TGSKGKKAPQ CGECKVTGHN KRNCPNRIVG EGGKRKRGYT RDMSNIQSSF GPEDDTSFGN 540 KTFYSASSCV HGTKTLSSSY TTPNSGFSCG EMSSGSTHYT SDGFTFEPPE YSVLESQFDT 600 QDTSPRDCLS IVNMGKKPST NKSTSQNRCK GKGLVPTLVA RNTTAKGNNN RSVVTSQRGS 660 SSTASHSNPV DHPFFGVRRY THKNHNSSDP VLHVNVTNHL SYKNNLTHIK GCGNNTLCGL 720 WYRHELPPRV QEKVASAGFA DFAILLGTKG RRDKHLLMAL AERWWDTTHT FHLDEVGELT 780 MTPKDFSAIT GLPVCGKSLK YDMEAHTKTE EVVRLFGTPI RSILNAKMKY RDIVNKYKRW 840 KPQTPEQEDQ LTRVFILAVL GSSLCNDKSD SVYLYYMPSL AKVEEIKDYN WGGAGLACMY 900 LCMDALSRGL VRSIGGYWRA WEVSHFVLGD LMIITIACYV VMLLS

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MEAETSKTNG IQGQKSVLNS EGYFSEAESL EETENVPYLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSKGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HGLANSLAFE  180
QHWQQMIDTY DLKGDWIEMM YRKRKRWAEA YCLGHFFGGN TTTQRVEGMH KNLKDGIGRG  240
MRLVECIPRI ERSLLRLRNE NVKDDFDSNN SQPVLRTHLR SVEEHAASIF THDIYKLIRN  300
EINKEAKLIL VQPVRNNEDP RVYTFSKFGR PDEKWTVVYY KKEQHLQCSC KLFESSGIPC  360
CHMFGVMKCD HMEQILPTLI MKRWTKDARR GSEFLVKLDD VPNETIQMAR FGSLSADFNK  420
LCFYGSQTEV AYKRLKAEFG RLNTLVETWK EQHEQTSLNL GCHNNIVRDP IVAKTKGKQT  480
TGSKGKKAPQ CGECKVTGHN KRNCPNRIVG EGGKRKRGYT RDMSNIQSSF GPEDDTSFGN  540
KTFYSASSCV HGTKTLSSSY TTPNSGFSCG EMSSGSTHYT SDGFTFEPPE YSVLESQFDT  600
QDTSPRDCLS IVNMGKKPST NKSTSQNRCK GKGLVPTLVA RNTTAKGNNN RSVVTSQRGS  660
SSTASHSNPV DHPFFGVRRY THKNHNSSDP VLHVNVTNHL SYKNNLTHIK GCGNNTLCGL  720
WYRHELPPRV QEKVASAGFA DFAILLGTKG RRDKHLLMAL AERWWDTTHT FHLDEVGELT  780
MTPKDFSAIT GLPVCGKSLK YDMEAHTKTE EVVRLFGTPI RSILNAKMKY RDIVNKYKRW  840
KPQTPEQEDQ LTRVFILAVL GSSLCNDKSD SVYLYYMPSL AKVEEIKDYN WGGAGLACMY  900
LCMDALSRGL VRSIGGYWRA WEVSHFVLGD LMIITIACYV VMLLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-24	FAR1 family protein