PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g079440.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 119aa    MW: 14100.4 Da    PI: 11.6354
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g079440.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.51.2e-053556223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      +C  Cg++F +++ L +H + H
  Pd.00g079440.m01 35 VCRVCGRRFYTNEKLLNHFKIH 56
                      6*****************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MIAYANRHAL NYVPQVVRER KERNRFVIRD GELNVCRVCG RRFYTNEKLL NHFKIHERQH  60
AKRLNQIESA RGSGRVKLVG IYSMKMEKYK NAARDVLTPR GRGFGFGAWW ISLRGRMLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.19e-36C2H2 family protein