PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g080370.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 278aa    MW: 31522.5 Da    PI: 6.5951
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g080370.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+ Ed ll+++++ +G g+W++ +++ g+ R++k+c++rw +yl
  Pd.00g080370.m01 14 RGSWTAREDTLLIQYIQSHGEGHWSSLPKKAGLLRCGKSCRLRWMNYL 61
                      89******************************99************97 PP
2Myb_DNA-binding55.91e-1767111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ T+eEd+l+v+++++lG++ W++Ia +++ gRt++++k++w+++
  Pd.00g080370.m01  67 RGNITPEEDDLIVRLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTH 111
                       7999******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGRAPCCSKV GLHRGSWTAR EDTLLIQYIQ SHGEGHWSSL PKKAGLLRCG KSCRLRWMNY  60
LRPDIKRGNI TPEEDDLIVR LHALLGNRWS LIAGRLPGRT DNEIKNYWNT HIAKRLRIQK  120
TSTQEVAPKP KSKCVQAEEA KKSDDDQENI GAITKRTKLH LPKPTRVSPV KTPVGSFCDG  180
EGDHDAEVPN YFHVSWSDDM KKKDDDCFGE GLVWGENVED CYDFVQVFDP ARSQNSEEAA  240
AAAERVAMTW KICEEYEQDI KADQDHGQLE SFVDSLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.15e-63MYB family protein