PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g081700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 760aa    MW: 85304.5 Da    PI: 9.876
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g081700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY536.31.2e-16313491367
           FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaarklr...eleelfkayGvryltvakiaelGftvstLvdmkdeelddl 89 
                       mdp+afsaslfkwd r ++++p+ r++ eaav+++  ++aaa aa r+ r   +le+lf+ayGvry+t+akiaelGftv+tL+dm+d eldd+
  Pd.00g081700.m01   1 MDPDAFSASLFKWDLRGMVVPPS-RAQLEAAVTPQGaAAAAAYAAVRSPRelgGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMRDGELDDM 92 
                       9**************99887666.555555554444133333333333334559*************************************** PP

           FLO_LFY  90 mkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekk 180
                       m+sls+ifr+dllvGeryGikaavraerrrl++ +  ++rr+++s d++t  aldalsqeg +++++++      + +++  + + v+  + +
  Pd.00g081700.m01  93 MSSLSQIFRWDLLVGERYGIKAAVRAERRRLDDVD--SRRRHTVSGDTTTtnALDALSQEGEKRKKQRR------TRKGQYRNFNGVGGGH-N 176
                       *********************************87..8888899888766569********65554433......2222222333333331.1 PP

           FLO_LFY 181 seeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiaker 273
                       ++++ +              + +e+d+d ++ + + +  +g   +er+rehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iaker
  Pd.00g081700.m01 177 NDHN-E-------------GVDNEDDNDIDDMNRHGNGAGGGLPTERRREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKER 255
                       1111.1.............11122445555555555555666677************************************************ PP

           FLO_LFY 274 GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLs 366
                       GekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawr+acykplvaiaa qgw+ida+fn+hprLs
  Pd.00g081700.m01 256 GEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWREACYKPLVAIAAGQGWEIDAIFNSHPRLS 348
                       ********************************************************************************************* PP

           FLO_LFY 367 i 367
                       i
  Pd.00g081700.m01 349 I 349
                       9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MDPDAFSASL FKWDLRGMVV PPSRAQLEAA VTPQGAAAAA AYAAVRSPRE LGGLEDLFQA  60
YGVRYYTAAK IAELGFTVNT LLDMRDGELD DMMSSLSQIF RWDLLVGERY GIKAAVRAER  120
RRLDDVDSRR RHTVSGDTTT TNALDALSQE GEKRKKQRRT RKGQYRNFNG VGGGHNNDHN  180
EGVDNEDDND IDDMNRHGNG AGGGLPTERR REHPFIVTEP GEVARGKKNG LDYLFHLYEQ  240
CRDFLIQVQN IAKERGEKCP TKVTNQVFRF AKKAGASYIN KPKMRHYVHC YALHCLDEEA  300
SNALRRVFKE RGENVGAWRE ACYKPLVAIA AGQGWEIDAI FNSHPRLSIC HRRSSETSAP  360
ELRSKLRRVV SGHEQMKIAF HQLKSQIRIG LFQAEEVFAS LAIPLMKLVG LKTVEMANED  420
RFTTIIIPAN TDSHQQSFGS GSSDRNRLSV KEEICAAKAA MAGKLVMEKQ KDQLIQLIRI  480
LKRIETQVNA RQSHMVQTLT HRRLYLHKFF HRAIDYLSTV DRVDHQTFRI SVLKLLRAAF  540
HEVGAVLGSV ESDVEELLQD LGSQMCDPMV EYVEGVKADL SDGGCVRLVG LVKEMAMAAR  600
EVRVELEAAR NKASVAEASK FEALSRLREA EDNVSKLKER LKLLPEPNKA SSAKVTKAIA  660
PHKFLGMEKE QTNDEKLLWA LLEKKRKYQT PESPLAPSEL PPLPSIYKRH RAKPTAVTRT  720
YSPRARTTPR LDARILLGSS PSATIQKAAP LKQISPKMHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.14e-93LFY family protein