PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g083240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 392aa    MW: 43438.1 Da    PI: 6.1909
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g083240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS372.74.8e-114203911374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetseknsseelaalklfsevsPil 91 
                       lv+lL++cAeav+ +d++ a+alL++l+ +a   g+++qR+a++f+++La+rla  ++  +  +  +p ++++   +++  al+l +e++P +
  Pd.00g083240.m01  20 LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLANRLALVQPLGAVGFigSPMNAKDFALDKKEEALRLVYEICPHI 112
                       689**************************************************9955544434413444444444999999************ PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefn 179
                       +f+h++aN+ Ilea+ege+ vH++D++++    +G QW  L+++La+R+++pp +lRiTgvg       ++l+ +g+ L+ +A++lg+++ef+
  Pd.00g083240.m01 113 QFGHFVANSSILEAFEGESYVHVVDLGMTlglpHGDQWRGLIESLATRAGQPPsRLRITGVGL----YGDRLQIIGDELEAYADRLGINLEFS 201
                       *************************99873333667*************888879********....9************************* PP

              GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       v v+++le+l++e++++  gE+l+Vn++lqlh +++es    +   +vL++v +lsPk++v+veq+++hn++ Fl rf+eal+yysa+fdsl+
  Pd.00g083240.m01 202 V-VESNLENLRPEDIKLLDGEVLVVNSILQLHCVVKESRGALN---SVLQMVHELSPKILVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLD 290
                       9.7********************************88877777...8********************************************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a lp+ +  r+k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF+++p++  +  +ak  l k+k  +gy++ ee+g+lvlgWk+
  Pd.00g083240.m01 291 AMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MLVNAKQWLGKIKvCEGYTILEEKGCLVLGWKS 381
                       ********************************************************97..5678999******99****************** PP

              GRAS 365 rpLvsvSaWr 374
                       +p+v++S+W+
  Pd.00g083240.m01 382 KPIVAASCWK 391
                       *********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MTNGEGNGAE EDGTADGMRL VQLLIACAEA VACRDKSHAS ALLSELRANA LVFGSSFQRV  60
ASCFVQGLAN RLALVQPLGA VGFIGSPMNA KDFALDKKEE ALRLVYEICP HIQFGHFVAN  120
SSILEAFEGE SYVHVVDLGM TLGLPHGDQW RGLIESLATR AGQPPSRLRI TGVGLYGDRL  180
QIIGDELEAY ADRLGINLEF SVVESNLENL RPEDIKLLDG EVLVVNSILQ LHCVVKESRG  240
ALNSVLQMVH ELSPKILVLV EQDSSHNGPF FLGRFMEALH YYSAIFDSLD AMLPKYDTRR  300
AKMEQFYFAE EIKNIISCEG PARVERHERV DQWRRRMSRA GFQAAPIKML VNAKQWLGKI  360
KVCEGYTILE EKGCLVLGWK SKPIVAASCW KC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.15e-82GRAS family protein