PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g083460.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 1455aa MW: 162191 Da PI: 8.8951

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g083460.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	1364	1386	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H Pd.00g083460.m01 1364 CPvkGCGKKFFSHKYLVQHRRVH 1386 9999*****************99 PP
2	zf-C2H2	11.9	0.00071	1422	1448	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H Pd.00g083460.m01 1422 YVCAepGCGQTFRFVSDFSRHKRKtgH 1448 899999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1455 aa Download sequence
MSASGLAAEP NQEVFSWLKT LPVAPEYHPT WAEFQDPIAY IFKIEKEASK YGICKIVPPV 60 PPSPKKTAIA NLNRSLAARA GPSGAPGTKS QPTFTTRQQQ IGFCPRKPRP VNRPVWQSGE 120 YYTFQQFEAK AKSFEKTYLR KCNKKGGLSP LDIETLYWKA TVDKPFSVEY ANDMPGSAFV 180 PLSARKSSTS RDAGDNVTLG ETAWNMRGVS RSKGSLLRFM KEEIPGVTSP MVYIAMLFSW 240 FAWHVEDHDL HSLNYLHMGA GKTWYGVPRE AAVAFEEVVR VQGYAGEINP LVTFSTLGQK 300 TTVMSPEVFI SSGIPCCRLV QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK 360 DAAIRRASIN YPPMVSHFQL LYDLALALCS RMPVRICAEP RSSRLKDKKK GEGEAVVKEL 420 FVQNVIQNND LLHVLGKGSS IVLLPQSSSD LSFCSKLRVG SHLRVNPGFA NGLYDQREEM 480 KSSGSDSDGL MIDRQQGIKQ VKGDYSVKGK LASLCESNRL PSLSGNNDAH ALNSKRLNMN 540 IERESNVEGE GLSDQRLFSC VTCGILSFAC VAIIQPTEAA ARYLMSADRS FFSDWVVGSG 600 LAGEVFQVAN EDPITSKNDP CTGLVENNAP AGLYDVPVQS ADYQIQRGDQ SNKPVSNTEM 660 QRDTSALGLL ALNYGNSSDS EEDQLAPDVP VCCDETNTTN CSFESRYDYQ SASPSPLRDS 720 YGGTTEAHSP PSPGFDCGNE LPLQSPDHYA RDGRKIANFK DSSYQNFDFS ADFKNNSAST 780 KTNGLVGTSV DPMKLSHSCS PDAHRPQTTE LSKVTLPIET TNTAFPPGCD EDSSRMHVFC 840 LEHAIEVEQQ LRSIGGVHIF LLCHPDYPRI EDEAKLMAEE LGISYLWNET TFRDATEEDE 900 KRIQSALDSE EAIAGNGDWA VKLGINLFYS ASLSRSHLYS KQMAYNSVIY NAFGRSSPAS 960 LPRRTDVYGR RSGKQKKVVA GKWSFHAWAM PDEKLEGQPE STRKTENTLV TKKYARKRKM 1020 TAETGTTKKV KCLEKEDAVS DYSVDDNSHQ QQRRFPKSKQ AEYIESGPTK KAKFVQTEFT 1080 LSDDSMQDDS HQPDGRNFRC KQANYIEGND VSDDSVGDES HQQHRRSAKS KQAKHMERDV 1140 VSDDSVEGSS RQQHGRVLRS KTAKGETDNF HKASSHQERG SISKSKQARF IERDDAAVGE 1200 TDNFLQQHKR ILRSKQAQQE TLQKMRRETP RQVKQGTAPL VKQGTRTLRK QQTAQQMKQQ 1260 TPRLRNNQSE QNFDLYADEG AEGGPSTRLR KRAPKPIKVS GTKPKEQQQT ARKKAKNVSA 1320 VKAQAGQNDA KLREEEAEFS CDIDGCTMSL GSKQELALHK RNICPVKGCG KKFFSHKYLV 1380 QHRRVHMDDR PLRCPWKGCK MTFKWAWART EHIRVHTGAR PYVCAEPGCG QTFRFVSDFS 1440 RHKRKTGHSA KKSRG

Sequence ? help Back to Top

Protein Sequence Length: 1455 aa Download sequence

MSASGLAAEP NQEVFSWLKT LPVAPEYHPT WAEFQDPIAY IFKIEKEASK YGICKIVPPV  60
PPSPKKTAIA NLNRSLAARA GPSGAPGTKS QPTFTTRQQQ IGFCPRKPRP VNRPVWQSGE  120
YYTFQQFEAK AKSFEKTYLR KCNKKGGLSP LDIETLYWKA TVDKPFSVEY ANDMPGSAFV  180
PLSARKSSTS RDAGDNVTLG ETAWNMRGVS RSKGSLLRFM KEEIPGVTSP MVYIAMLFSW  240
FAWHVEDHDL HSLNYLHMGA GKTWYGVPRE AAVAFEEVVR VQGYAGEINP LVTFSTLGQK  300
TTVMSPEVFI SSGIPCCRLV QNAGEFVVTF PRAYHTGFSH GFNCGEAANI ATPEWLRVAK  360
DAAIRRASIN YPPMVSHFQL LYDLALALCS RMPVRICAEP RSSRLKDKKK GEGEAVVKEL  420
FVQNVIQNND LLHVLGKGSS IVLLPQSSSD LSFCSKLRVG SHLRVNPGFA NGLYDQREEM  480
KSSGSDSDGL MIDRQQGIKQ VKGDYSVKGK LASLCESNRL PSLSGNNDAH ALNSKRLNMN  540
IERESNVEGE GLSDQRLFSC VTCGILSFAC VAIIQPTEAA ARYLMSADRS FFSDWVVGSG  600
LAGEVFQVAN EDPITSKNDP CTGLVENNAP AGLYDVPVQS ADYQIQRGDQ SNKPVSNTEM  660
QRDTSALGLL ALNYGNSSDS EEDQLAPDVP VCCDETNTTN CSFESRYDYQ SASPSPLRDS  720
YGGTTEAHSP PSPGFDCGNE LPLQSPDHYA RDGRKIANFK DSSYQNFDFS ADFKNNSAST  780
KTNGLVGTSV DPMKLSHSCS PDAHRPQTTE LSKVTLPIET TNTAFPPGCD EDSSRMHVFC  840
LEHAIEVEQQ LRSIGGVHIF LLCHPDYPRI EDEAKLMAEE LGISYLWNET TFRDATEEDE  900
KRIQSALDSE EAIAGNGDWA VKLGINLFYS ASLSRSHLYS KQMAYNSVIY NAFGRSSPAS  960
LPRRTDVYGR RSGKQKKVVA GKWSFHAWAM PDEKLEGQPE STRKTENTLV TKKYARKRKM  1020
TAETGTTKKV KCLEKEDAVS DYSVDDNSHQ QQRRFPKSKQ AEYIESGPTK KAKFVQTEFT  1080
LSDDSMQDDS HQPDGRNFRC KQANYIEGND VSDDSVGDES HQQHRRSAKS KQAKHMERDV  1140
VSDDSVEGSS RQQHGRVLRS KTAKGETDNF HKASSHQERG SISKSKQARF IERDDAAVGE  1200
TDNFLQQHKR ILRSKQAQQE TLQKMRRETP RQVKQGTAPL VKQGTRTLRK QQTAQQMKQQ  1260
TPRLRNNQSE QNFDLYADEG AEGGPSTRLR KRAPKPIKVS GTKPKEQQQT ARKKAKNVSA  1320
VKAQAGQNDA KLREEEAEFS CDIDGCTMSL GSKQELALHK RNICPVKGCG KKFFSHKYLV  1380
QHRRVHMDDR PLRCPWKGCK MTFKWAWART EHIRVHTGAR PYVCAEPGCG QTFRFVSDFS  1440
RHKRKTGHSA KKSRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein