PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g085850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 137aa    MW: 15940.3 Da    PI: 9.8328
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g085850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-116107195
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 
                       +p GfrF+P+de +v  +L + + ++k  l+l +  ++ +++  +++eP+++ kk+ +    ++++yf sk +k ++ ++  +r+ ++g+W++
  Pd.00g085850.m01   6 VPLGFRFRPSDEKIVGSFLYPFLVESKpfLSLYNYfFHACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNRGTWSE 97 
                       589******************97777658555555588888733589*****8544433224557777777766554.556667999****** PP

               NAM  86 tgkdkevlsk 95 
                       t +++  +++
  Pd.00g085850.m01  98 TESSNLFMKR 107
                       *998777763 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MEESLVPLGF RFRPSDEKIV GSFLYPFLVE SKPFLSLYNY FFHACNLFGN NTEPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NRGTWSETES SNLFMKRSLE IPTQTPLAER  120
ESFATRIKVP RITQGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.11e-07NAC family protein