PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g086150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 233aa    MW: 26660.1 Da    PI: 9.0014
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g086150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.86.6e-1761431128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 
                       +p GfrF+P+dee+v  +L + + ++k  l+l +  ++ +++  +++ P+++ kk+ +    ++++yf sk +k ++ ++  +r+ + g+W++
  Pd.00g086150.m01   6 VPLGFRFRPSDEEIVGSFLYPFLVESKpfLSLYNYfFHACNLfgNNTGPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSE 97 
                       589******************977776585555555888887335789****7544433224557777777766554.5566668999***** PP

               NAM  86 tgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       t ++k v++k     + + +g k+ + + +  + +  +t W+++ey+l
  Pd.00g086150.m01  98 TESSKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143
                       *******999877666667********984..334469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MEESLVPLGF RFRPSDEEIV GSFLYPFLVE SKPFLSLYNY FFHACNLFGN NTGPSEIWKK  60
YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK  120
RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRSYDFDF VICRMRKNDR VGIKATNLKR  180
GSQDNEEKKM TTNKKMKKDV QMGSTESSSQ QGCSSSPIGG DLVGFDPIDL TIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56530.12e-10NAC family protein