PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g088150.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 140aa    MW: 16168.1 Da    PI: 5.8159
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g088150.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.63.3e-212282257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      r+R+t+t+ ql+ Le+ Fe+ + +p +++++e++++l    +++e++V++WFqNrRa+ k+
  Pd.00g088150.m01 22 RQRWTPTPVQLQMLERIFEEgTGTPCKQKIKEITMELtqhgQISETNVYNWFQNRRARSKR 82
                      89*****************99**************************************97 PP
2Wus_type_Homeobox102.33.5e-332184265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ar+RWtPtp Q+++Le+++++G+ tP k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
   Pd.00g088150.m01 21 ARQRWTPTPVQLQMLERIFEEGTGTPCKQKIKEITMELTQHGQISETNVYNWFQNRRARSKRKQ 84
                       789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MRLGNFYCDP FMASGGHKIT ARQRWTPTPV QLQMLERIFE EGTGTPCKQK IKEITMELTQ  60
HGQISETNVY NWFQNRRARS KRKQSVPAQN NGESEAEPEV ESPRDEKTKP EDIMSLDNSA  120
PRAENMYLQS PELGFGNFDW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.14e-49WOX family protein