PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g088390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 452aa MW: 50735.4 Da PI: 8.6708

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g088390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.5	1.5e-24	334	438	32	128
NAM 32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrap 114 + + + +iy+ +P +Lp k++ ++++fF+k+ ++yatg+rk r+ +++ +W++tgk+k++++ +g ++g+kk++v+y +++ + Pd.00g088390.m01 334 KSFGDNGIYYDHPANLP-GSKNDGSSLHFFHKTINAYATGHRKCRKvdchrslaAEHVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGS 424 4577889********.556778899**************86888888877999********.999*******4334667 PP NAM 115 kgektdWvmheyrl 128 k+ k++Wvmh+y+l Pd.00g088390.m01 425 KADKSNWVMHQYHL 438 888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSPPRAPGLV PPFKPIVEDL LVITICGHVF HQLCLQQWFE YSARTKRYTC PVCKQNCKEK 60 DAGQLYFQSV EDSADPSLTQ RPINQCKEDP VVLRREVKRL EVTALGLRST FDLQGKELKE 120 PKEELCLCKD EAKKEAVLKN EALKQQASMK QQLHMKSEAF DKSTMERLRL QDRNMALAKE 180 LAAFKLVSDL DLNEDEVLKL STLGGGHEIG VLHLQDASAD IRELDLDLGS TFLHQSHVLL 240 VLATLLLLLD RRHDAPCGSE RANHVLVSHE EQVALLHGCR GPRTPLECLR KSSACDVFVE 300 MTHGGNFAKL IIGARKYMGH RLKSIKPDKG LMSKSFGDNG IYYDHPANLP GSKNDGSSLH 360 FFHKTINAYA TGHRKCRKVD CHRSLAAEHV RWHKTGKTKP IMENGVQKGC KKIMVLYKSS 420 KKGSKADKSN WVMHQYHLGT EDGEKEGESG SA

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSPPRAPGLV PPFKPIVEDL LVITICGHVF HQLCLQQWFE YSARTKRYTC PVCKQNCKEK  60
DAGQLYFQSV EDSADPSLTQ RPINQCKEDP VVLRREVKRL EVTALGLRST FDLQGKELKE  120
PKEELCLCKD EAKKEAVLKN EALKQQASMK QQLHMKSEAF DKSTMERLRL QDRNMALAKE  180
LAAFKLVSDL DLNEDEVLKL STLGGGHEIG VLHLQDASAD IRELDLDLGS TFLHQSHVLL  240
VLATLLLLLD RRHDAPCGSE RANHVLVSHE EQVALLHGCR GPRTPLECLR KSSACDVFVE  300
MTHGGNFAKL IIGARKYMGH RLKSIKPDKG LMSKSFGDNG IYYDHPANLP GSKNDGSSLH  360
FFHKTINAYA TGHRKCRKVD CHRSLAAEHV RWHKTGKTKP IMENGVQKGC KKIMVLYKSS  420
KKGSKADKSN WVMHQYHLGT EDGEKEGESG SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	2e-36	NAC family protein