PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g089740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 109aa MW: 12739.3 Da PI: 4.7785

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g089740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	43.4	7.5e-14	28	66	1	34
G2-like 1 kprlrWtpeLHerFveaveqLGGse.....kAtPktile 34 kprlrWtp+LH+rFv+av++LGG++ + tP++i + Pd.00g089740.m01 28 KPRLRWTPDLHDRFVDAVTKLGGPDmrerrRITPSSISR 66 79*********************9733333567777765 PP
2	Myb_DNA-binding	37.2	6.7e-12	30	67	1	30
TSSS-HHHHHHHHHHHHHTTTT........-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........tWktIart 30 r+rWT+++++++vdav++lGg+ t+++I+r Pd.00g089740.m01 30 RLRWTPDLHDRFVDAVTKLGGPdmrerrriTPSSISRL 67 89*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence
MERNYGGVCD GEGNCGYENG VMMTRDPKPR LRWTPDLHDR FVDAVTKLGG PDMRERRRIT 60 PSSISRLQEL LLLPPKQTDK QQVGWRYDLD VEEVEEEQLQ VYNCQKEQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	5e-17	G2-like family protein