PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g091230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 203aa    MW: 22043.2 Da    PI: 5.2072
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g091230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.2e-053759123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C + F++   L  H+++H
  Pd.00g091230.m01 37 YTCTFCRREFRSAQALGGHMNVH 59
                      9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MWNPTPAQEP EDDSWEVRAF AEDTGNVMGT TWPPRSYTCT FCRREFRSAQ ALGGHMNVHR  60
RDRARLHQSN PPINPASASS ASTSSFIIPT QEFVNANGGL CLVYQLPSPS SINGASFNTA  120
TTLMSSSSHG VEQSPSTLLS ISPNIPSHDY LASVVPPGTN SQYCHSRKSA DDPEPSTPET  180
ENGNFEELDL ELRLGHGRPT VPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.14e-38C2H2 family protein