PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g095280.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 355aa    MW: 40370.2 Da    PI: 9.4938
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g095280.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.7e-14114198899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        d ++++ l++p  f+++++g      + t++ ++g+   v+l  ++++++ ++ kGW +Fvk++ +++ Df++F +dg sef   v++++k
  Pd.00g095280.m01 114 DDDFSKH-LRIPPAFIKNFNGRRL--GKCTIRGPTGKCCAVEL--EQRRDGLFFHKGWPGFVKDHFIESEDFLIFDYDGGSEF--DVTIYDK 198
                       4666666.********88877743..489999***********..*********************************98998..8888876 PP
2B333.29.3e-11236330298
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                        k+++p d  +   l +pk+ a +      +g+   + t++l+d++grsW v+l +  ++gr  +++ W+   + n++  gD+++F++++  +
  Pd.00g095280.m01 236 TKTFKPRDLYS---LLIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIIFEFVK--Q 321
                       56665555554...6899999988877665333.35679***************.678888899***********************765..6 PP

                       E..EEEEE- CS
                B3  90 felvvkvfr 98 
                       +  ++++fr
  Pd.00g095280.m01 322 GVILIHIFR 330
                       777999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSRLQTRWSR GYGFFKFQKA KAEGEETSAS QPQRTSRRST PSDLFWLLEV VSHLKGNLGP  60
STSSPGAEQS LVELGRVWWA PISERLLIIH FRFQMDKKLK CPLERPSFRV FLVDDDFSKH  120
LRIPPAFIKN FNGRRLGKCT IRGPTGKCCA VELEQRRDGL FFHKGWPGFV KDHFIESEDF  180
LIFDYDGGSE FDVTIYDKTC CEKDVKAAAK RHASDHLAET STGGPISFRS ENACFTKTFK  240
PRDLYSLLIP KSIAVTEGLM SSEGVLIKET IMLQDQTGRS WLVQLHVTCD GRLEMKREWR  300
TCRDTNQISH GDTIIFEFVK QGVILIHIFR GRGEGNSSSV VVLSGVLPRK SSQRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.14e-16B3 family protein