PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g095300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 202aa    MW: 22389.1 Da    PI: 9.8838
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g095300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.81.5e-11621381091
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                        + + rl+lp  f+++ +++k    + ++  +   sW v++   ++ ++   +++GW+eF + +gLk g++++Fk++g++ f+
  Pd.00g095300.m01  62 GF-NTRLSLPVAFCSSLSENKLD--KAVI-KSCLGSWLVRV--GRTVDGvLSFEEGWEEFLNHHGLKLGEILIFKHNGKRAFN 138
                       44.457********999766433..3444.556689*****..666666599***********************98876663 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MPFRALVAHR GRSFRLFGAC ALYSVLKVQA PANAINGYVY TLYSAGFMAV KCSKFFKFLA  60
PGFNTRLSLP VAFCSSLSEN KLDKAVIKSC LGSWLVRVGR TVDGVLSFEE GWEEFLNHHG  120
LKLGEILIFK HNGKRAFNVV AYEAHGSEKV YDSKGGSKVT FFLCISHVAL HLLVAGSLDY  180
FQEKALQKQL HPQPQGLCSH AR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-10B3 family protein