PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g095760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 260aa    MW: 29025.7 Da    PI: 8.2056
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g095760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY857e-2793153159
                       ---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dgy+WrKYGqK+ k+++  pr+Y++C+ a +Cpvkkkv+r+  d+++++ tYegeHnh+
  Pd.00g095760.m01  93 VKDGYQWRKYGQKVTKDNPsSPRAYFKCSLApRCPVKKKVQRCMVDKSLLVATYEGEHNHD 153
                       58**************997369*******999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MISSCPVALE ILMNMDAHTP TKRKVDDLQQ DFLRLRKENE ALRFLLQAMS TKCNTLEQLI  60
REKNIERHDQ FPVAQKTTQF LVRTDSKDNT LIVKDGYQWR KYGQKVTKDN PSSPRAYFKC  120
SLAPRCPVKK KVQRCMVDKS LLVATYEGEH NHDAINGSPL GLFCSNINNN DVINIVSPSN  180
SSRPVPITLD LTLSGSTSNQ ENNGSAGSPQ NSSSCAQNIN CESRIEDYVA YLTRDHNFTQ  240
ALAAAVASSI TRPSADTENQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.16e-37WRKY family protein