PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g096910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 377aa MW: 43057.8 Da PI: 9.4406

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g096910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72	1.3e-22	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA+e+GFsvr +skks ++ge++++++vC+keg+ ++e+++ +r+r + r +Cka+l v k+k g ++vt +e+ H+H+++ Pd.00g096910.m01 48 DFYNQYAREAGFSVRSYSSKKS-KDGEVIRKEYVCNKEGSWSTETSS--VVKRRRGVGRESCKARLIVVKSKYGGYVVTIFEETHTHPMT 134 6***************9999.8889************9988..77888999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAGFS 60 VRSYSSKKSK DGEVIRKEYV CNKEGSWSTE TSSVVKRRRG VGRESCKARL IVVKSKYGGY 120 VVTIFEETHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI 180 ENVGFTQQDM YNSNRDRRMK IKGHDGEMLF DHFMNEQGKN PGFIFKLHEL PDQYILKRWT 240 RSARFDLVVD NDGVEISVDN SLIGKRSALF QRYSNVIDKV ILSDEASQIF CETLDSLIER 300 IKPLLHGAEE VLPSARRSIA FETSINEPDL VKAKGSGKKL KGRKELAREK YKGRRCNGCG 360 KYGQTHDKRN CPMLQKS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEANNGILVH METDSETNPS VSIFYPQVIG ELTPFQGQQF ETLEEVYDFY NQYAREAGFS  60
VRSYSSKKSK DGEVIRKEYV CNKEGSWSTE TSSVVKRRRG VGRESCKARL IVVKSKYGGY  120
VVTIFEETHT HPMTTPRRRH LLKSHRRISG VDQLVAQQLI SVNVSTHQQY DILATQAGGI  180
ENVGFTQQDM YNSNRDRRMK IKGHDGEMLF DHFMNEQGKN PGFIFKLHEL PDQYILKRWT  240
RSARFDLVVD NDGVEISVDN SLIGKRSALF QRYSNVIDKV ILSDEASQIF CETLDSLIER  300
IKPLLHGAEE VLPSARRSIA FETSINEPDL VKAKGSGKKL KGRKELAREK YKGRRCNGCG  360
KYGQTHDKRN CPMLQKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-19	FAR1 family protein