PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g097490.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 353aa MW: 40593.8 Da PI: 9.8276

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g097490.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.7	1.9e-17	83	163	6	89
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +++ + +g l lp kfa++h ++k++ + ++l+ ++gr+W v+++y+ + +++GW F+++n+Lk+gD++vF l++ +e Pd.00g097490.m01 83 IQPVYIHRGYLHLPSKFARRH-LVKQRARNIILKILDGRTWLVEFKYETSI--ARFQRGWLAFARDNNLKVGDVCVFVLIDCNE 163 5666677899*********.45567789***********555554..669********************986333 PP
2	B3	50.4	4.1e-16	273	352	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p +fa+++ +k +++t+tl+ + rsW v+li k ++ l +GW+eFv +n L gD+++F+l++r++ l+v++fr Pd.00g097490.m01 273 LHVPVTFARSFVKK--RKQTVTLQV-RERSWPVNLIGHTKESGAKLCGGWREFVTENCLMKGDVCIFELIERNDIVLKVHIFR 352 789***999755..444677655.78***9877777788999******************999999**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MEIELRRSND GWVWFDKGWP EFSKLCSLDY GENDMPTKKD FGGSSSSRIF LGRMHPLTKS 60 EKALALQRAN AFESEYPYFL VAIQPVYIHR GYLHLPSKFA RRHLVKQRAR NIILKILDGR 120 TWLVEFKYET SIARFQRGWL AFARDNNLKV GDVCVFVLID CNERLFEVFF YRTNNAEDCP 180 LSPGHGGVAI DQVEKRRNPM IKVETDCTTN YENGVSCSLD PSLEIGKYKR LKTSGQVTQR 240 PLNSSSRSLE AANRFTPKNP SFRATLGSTP LILHVPVTFA RSFVKKRKQT VTLQVRERSW 300 PVNLIGHTKE SGAKLCGGWR EFVTENCLMK GDVCIFELIE RNDIVLKVHI FRC

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MEIELRRSND GWVWFDKGWP EFSKLCSLDY GENDMPTKKD FGGSSSSRIF LGRMHPLTKS  60
EKALALQRAN AFESEYPYFL VAIQPVYIHR GYLHLPSKFA RRHLVKQRAR NIILKILDGR  120
TWLVEFKYET SIARFQRGWL AFARDNNLKV GDVCVFVLID CNERLFEVFF YRTNNAEDCP  180
LSPGHGGVAI DQVEKRRNPM IKVETDCTTN YENGVSCSLD PSLEIGKYKR LKTSGQVTQR  240
PLNSSSRSLE AANRFTPKNP SFRATLGSTP LILHVPVTFA RSFVKKRKQT VTLQVRERSW  300
PVNLIGHTKE SGAKLCGGWR EFVTENCLMK GDVCIFELIE RNDIVLKVHI FRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-20	B3 family protein