PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g098840.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 431aa    MW: 48167.6 Da    PI: 5.2768
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g098840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.19e-2064154199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k l++s+v +  ++ lp  f+++h  +  +++t+tledesgr+ ++k+i  k++    l++GW++F+ +++L egD++vF+l++ ++f  +
  Pd.00g098840.m01  64 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--K 148
                       89************************644..678****************666665....9**********************9876666..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  Pd.00g098840.m01 149 VYIIRS 154
                       998886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MPMKELSNTQ IKNMLGQAGK SPALSNTQYE FPVDGSPSRG QAKSSAVIQA QEVRSKLEPR  60
FPSFVKSLVR SHVASCFWMG LPSLFCKSHL PDKDITMTLE DESGRQCQLK YIAYKTGLSA  120
GWRQFAASHN LIEGDVLVFQ LVEPTKFKVY IIRSNDLTEV DGGLGLLNLD SHTKRKDAGK  180
FIDVSVYKDN AETGTEACND ATRKRAHSPP SEAQKKKKIG LQPVEQSEDD SDEVDSEVLE  240
ESKSPDTALQ FEDIQSFENF SILVNGLLVD SELPEDVRRK YYKLCCSQNA FLHENVAEGM  300
NHKLVVGAIS ETVNIADAIK ACKLTTTWDD FVSWDKYLKA FELLGMNVGF LRDRLCRLAN  360
LSNDSGAAVE ARMYKEAKIE RSQAGIGIRN IEVKLEELRD VCDEFGAAIE SLRSKAEIYT  420
LKFHEEVTAP W
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203218RKRAHSPPSEAQKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.16e-37B3 family protein