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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Pd.00g098840.m01 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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| Family | B3 | ||||||||
| Protein Properties | Length: 431aa MW: 48167.6 Da PI: 5.2768 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 62.1 | 9e-20 | 64 | 154 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f+k l++s+v + ++ lp f+++h + +++t+tledesgr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f +
Pd.00g098840.m01 64 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--K 148
89************************644..678****************666665....9**********************9876666..9 PP
EEEE-S CS
B3 94 vkvfrk 99
v ++r+
Pd.00g098840.m01 149 VYIIRS 154
998886 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 431 aa Download sequence |
MPMKELSNTQ IKNMLGQAGK SPALSNTQYE FPVDGSPSRG QAKSSAVIQA QEVRSKLEPR 60 FPSFVKSLVR SHVASCFWMG LPSLFCKSHL PDKDITMTLE DESGRQCQLK YIAYKTGLSA 120 GWRQFAASHN LIEGDVLVFQ LVEPTKFKVY IIRSNDLTEV DGGLGLLNLD SHTKRKDAGK 180 FIDVSVYKDN AETGTEACND ATRKRAHSPP SEAQKKKKIG LQPVEQSEDD SDEVDSEVLE 240 ESKSPDTALQ FEDIQSFENF SILVNGLLVD SELPEDVRRK YYKLCCSQNA FLHENVAEGM 300 NHKLVVGAIS ETVNIADAIK ACKLTTTWDD FVSWDKYLKA FELLGMNVGF LRDRLCRLAN 360 LSNDSGAAVE ARMYKEAKIE RSQAGIGIRN IEVKLEELRD VCDEFGAAIE SLRSKAEIYT 420 LKFHEEVTAP W |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 203 | 218 | RKRAHSPPSEAQKKKK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G19184.1 | 6e-37 | B3 family protein | ||||




