PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g098910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 245aa    MW: 26988 Da    PI: 7.5409
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g098910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.8e-21123172255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++g
  Pd.00g098910.m01 123 KYRGVRRRP-WGKWAAEIRDPR----RaARVWLGTFETAEEAARAYDKAAIEFRG 172
                       8********.**********82....48***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MPSHAIRIQH EQDHCIMVSA LKHVISGGIN AGGSGPTSQQ QQQLMGAVHS ATSSVPSTRD  60
GTQSATDQVH MLSFSAEGDT CRVCGIEGCL GCDYFPSTTL PDRNKQLNLG SGANAGTRKG  120
KNKYRGVRRR PWGKWAAEIR DPRRAARVWL GTFETAEEAA RAYDKAAIEF RGDKAKLNFS  180
LTSSDEHNNI TSSSRTRTSS QLIRSMEEAD QDKVNPITVK QSEKIEIYES SAPQEENDQF  240
LWDML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-28ERF family protein