PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g100140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 330aa    MW: 37502 Da    PI: 4.6964
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g100140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM713.2e-22101413128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                       +GfrFhPtd+el++++L kk+ +k+    + ++++++++ + ++ePw         +  ++++yfFs+ ++ +++g+r +r + + g+W++  
  Pd.00g100140.m01  10 VGFRFHPTDQELISYFLYKKAVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPNGSRIKRkIEAGGTWSEAF 102
                       7*******************888886765556679999725689***9964233223356799******************5555899**998 PP

               NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++k   +++g+ +g kk L +   ++   ++ +W+++ey+l
  Pd.00g100140.m01 103 SKKVYDETTGNPIGRKKNLLYE--NEGCEHHGKWLLEEYSL 141
                       865555559999*******997..33444689*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MTNYSGNRLV GFRFHPTDQE LISYFLYKKA VAKEPLMASY SNIVHDFNLL GETEPWVVWD  60
IFGGPDLIDE DLYFFSELKN LSPNGSRIKR KIEAGGTWSE AFSKKVYDET TGNPIGRKKN  120
LLYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSTQE LKEKPSNKKA  180
RKGLGSPRIK IEDEEPHRTS GLSSVYNNLD QELIIDTNYN AISNNICGDN QDNMLMTSDF  240
ASDPVCFDYG GLTDEEYVFD VNELLASVEP QPLSLELPQM AETLEPLLSS GLGDDRAVEA  300
WNSSGLENIY ATNKKTSHIG STVKKYFENL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-16NAC family protein