PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1003740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 296aa    MW: 34102.9 Da    PI: 5.4153
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1003740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.57.6e-2855151185
           trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcp 80 
                        +Wt+q+v++Li+a+++++e+ ++++           +kk++W++vsk+m+ergf++sp+qC++k+++lnkrykk++++ +++ +++++++ +
  Pd.00g1003740.m01  55 KWTDQMVKLLITAVSYIGEDTSSDCgsggrrkystlQKKGKWKSVSKVMAERGFHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENQA 146
                        7*********************99888899999999**********************************************6699999988 PP

           trihelix  81 yfdql 85 
                        ++d +
  Pd.00g1003740.m01 147 LLDVI 151
                        87765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MHTCDQTISM MDYNKGERSK NSASDEDEPS YTEEGTDGHA EGNRGKKGSP WQRVKWTDQM  60
VKLLITAVSY IGEDTSSDCG SGGRRKYSTL QKKGKWKSVS KVMAERGFHV SPQQCEDKFN  120
DLNKRYKKLN DMLGRGTSCQ VVENQALLDV IDYLTEKEKD DVRKILSSKH LFYEEMCSYH  180
NGNRLHLPHD PALQKSLQRA LRRDEHDNDD LRRHHHDDLD EDDQDMETDE HEDFEENNAS  240
HGDNRGIYVL EDSVILTILD YYILEIKRPV SVSCWSLLHR LRLDLAVLGL AVLGLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-107Trihelix family protein